Yeah, hopefully BV 3 will fix that, whenever it happens.
just as a comparison, here are all Exe config BVs vs the BV minus the JJs (JJs have less BV than MASC, so I went with the higher BV total...for those configs that have a supercharger, I left that BV in since supercharger + MASC is something that can be used together, unlike running and jumping)
Prime 2749 (original BV) - 2488 (modified BV)
A 3112 - 2868
B 2940 - 2660
C 2740 - 2481
D 2698 - 2464
E 2988 - 2741
F 3606 - 3276
G 3825 - 3499
H 3059 - 2749
I 3339 - 2972
J 2891 - 2607
K 3125 - 2880
L 3132 - 2810
P 3052 - 2743
T 2558 - 2340
TC 3363 - 3034
only 3 configs break the 3k BV mark