Is there anything canon that says compact cores are fundamentally different from standard cores? Especially considering they're exactly half the mass (per overall ship mass), I've always figured they're basically the same thing, just with an extra thingamabob that allows the core to jump twice the usual ship mass. That would also be consistent with the extra volume warships have around their cores, and the needle shape of jumpships.
A core of N size is X long and Y wide. A jumpship using that core would be slightly longer than X and only marginally wider than Y. A warship might be about the same length (X-ish) but significantly wider than Y.
I like the earlier estimate of 5mx200m, based on the density of germanium. That would be pretty rough, considering it's not pure germanium, but an alloy, and includes extra gear, like the helium tanks. Maybe say the core itself is about 5m, but the surrounding support structure extends that by 2-5m, depending. Maybe the He tanks are towards aft, ballooning the core to 10m total diameter, but towards the stern, it's only 7m diameter. If the overall jumpship is 12-15m in diameter, that would mean the back half is almost all engineering, without much room between the core and inner hull. But towards the nose, and presumably the bridge, there's more room for bunks, shuttle bays, etc. By the way, since many canon jumpships seem to have a slightly bulbous nose, that's probably where the shuttle bays are, actually. More volume.
(Anyone else noticed the similarity between jumpships and the XD-1 in 2001?)
Using that rough idea, and canon artwork, many warships might be something like 50-100m in diameter, giving them a lot more internal volume around the core. Especially if the core is offset, that would give them plenty of room for cargo bays, fighter/shuttle bays, weapons, etc.